研究报告

米曲霉木糖还原酶基因的克隆及序列分析

  • 洪志宏 ,
  • 杜 钰 ,
  • 林 毅 ,
  • 陈宏文
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  • (华侨大学 化工学院生物工程与技术系,福建 厦门 361021)
洪志宏(1987-),男,福建龙海人,硕士研究生,从事基因工程研究。E-mail: catmihzh@hqu.edu.cn

收稿日期: 2013-05-02

  网络出版日期: 2013-09-01

Cloning and Sequence Analysis of Xylose Reductase Gene from Aspergillus oryzae

  • HONG Zhi-hong ,
  • DU Yu ,
  • LIN Yi ,
  • CHEN Hong-wen
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  • (Department of Bioengineering & Biotechnology, College of Chemical Engineering, Huaqiao University, Xiamen 361021, Fujian China)

Received date: 2013-05-02

  Online published: 2013-09-01

摘要

木糖还原酶(XR, EC 1.1.1.21)是真菌微生物代谢木糖的关键酶之一。本文以米曲霉基因组DNA为模板,克隆木糖还原酶基因(xr,GenBank登录号:FJ957890.1),并对XR的序列、系统进化树、理化性质及蛋白结构等进行生物信息学分析。结果表明: xr基因序列长1449 bp,其中开放阅读框长960 bp,编码319个氨基酸,蛋白质分子质量35.9 kDa,等电点为5.78;米曲霉XR与其他菌种XR有较高的同一性,含有醛酮还原酶家族的两个指纹结构和一个参与辅酶结合活性位点指纹结构,以及醛酮还原酶家族典型的(β/α)8 TIM桶结构,说明米曲霉XR属于醛酮还原酶家族。

本文引用格式

洪志宏 , 杜 钰 , 林 毅 , 陈宏文 . 米曲霉木糖还原酶基因的克隆及序列分析[J]. 亚热带植物科学, 2013 , 42(03) : 187 -192 . DOI: 10.3969/j.issn.1009-7791.2013.03.001

Abstract

Xylose reductase (XR, EC 1.1.1.21) is one of the key enzymes of xylose metabolism for the eukaryotic microorganism. The XR gene (xr) from Aspergillus oryzae was amplified by PCR and cloned (GenBank accession number: FJ957890.1). Then the similarity of amino acid sequences, phylogenetic trees, physic-chemical property and protein structure were analyzed bioinformatically. Sequence analysis reveals that the length of xr is 1449 bp, which contains 960 bp open reading frame encoding 319 amino acids. A. oryzae XR has high sequence identity with other strain XR. The presence of two aldo-keto reductase family signatures, a putative coenzyme-binding active site signature and a typical parallel beta-8/alpha-8-barrel tertiary structure suggests that XR is a member of aldo-keto reductase superfamily. The obtained information lays the basis for the expression of XR and further research on xylose metabolic regulation and widely industrial application of A. oryzae.
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