Subtropical Plant Science ›› 2013, Vol. 42 ›› Issue (02): 91-96.DOI: 10.3969/j.issn.1009-7791.2013.02.001

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Establishment and Optimization of ISSR-PCR Reaction System in Precocious Pyrus pyrifolia

SONG Yan-chun,LI Yong-yu,CHEN Jian-yan,HUANG Tian-yi,GONG Li,WU Shao-hua   

  1. College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian China
  • Received:2013-01-19 Revised:2013-01-19 Online:2013-06-10 Published:2013-06-10
  • Contact: WU Shao-hua

早熟砂梨ISSR-PCR反应体系的建立与优化

宋燕春,李永裕,陈建烟,黄添毅,龚理,吴少华   

  1. 福建农林大学园艺学院,福建 福州 350002
  • 通讯作者: 吴少华
  • 作者简介:宋燕春(1986-),男,四川泸州人,硕士研究生,从事园艺植物分子生物学研究。
  • 基金资助:

    高等学校博士学科点专项科研基金(20113515110011)、福建省科技计划重点项目(2012N0005)

Abstract: To obtain 7 factors (DNA template dosage, Taq DNA polymerase dosage, primer concentration, dNTP concentration, Mg2+ concentration, annealing temperature and PCR cycles ) of ISSR-PCR Reaction System in Pyrus pyrifolia ‘Cuiguan’, a precocious cultivar of southern China was been used as template. An optimum reaction system was been established. The final total volume was 20 μL, contains 2 μL 10×PCR buffer (Mg2+ free), 60 ng DNA template, 0.5 U Taq DNA polymerase, 1 μmol/L of primer concentration, 90 μmol/L of dNTP concentration, 2.25 mmol/L of Mg2+ concentration. Amplication procedure was as follows: initial-denaturing of 5 min at 94 ℃, followed by 42 cycles of 45 s for denaturing at 94 ℃, at annealing temperature for 45 s and 1 min at 72 ℃, after that 10 min extending at 72 ℃, and then keep at 4 ℃. Use 1.5% of agarose gel electrophoresis to test the genetic polymorphism.

Key words: precocity, Pyrus pyrifolia, ISSR, system optimization

摘要: 以我国南方主栽的早熟砂梨品种‘翠冠’Pyrus pyrifolia ‘Cuiguan’为材料,对ISSR技术体系中的模板DNA浓度、Taq DNA聚合酶用量、引物浓度、dNTP浓度、Mg2+浓度、退火温度、PCR循环数等7个主要因素进行优化和筛选,建立了适合早熟砂梨的ISSR-PCR反应体系。最终反应体系为20 μL体系中10×PCR buffer(不含Mg2+)2 μL,模板DNA浓度60 ng,TaqDNA聚合酶0.75 U,引物浓度1 μmol/L,dNTP浓度90 μmol/L,Mg2+浓度2.25 mmol/L。扩增程序为:预变性94 ℃ 5 min,变性94 ℃ 45 s,退火45 s,72 ℃延伸1 min,共42个循环,然后72 ℃再延伸10 min,4 ℃保存,用1.5%琼脂糖凝胶电泳检测多态性。

关键词: 早熟, 砂梨, ISSR, 体系优化

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